{
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  "Package": "gems",
  "Type": "Package",
  "Title": "Generalized Multistate Simulation Model",
  "Version": "1.1.1",
  "Date": "2017-03-26",
  "Author": "Luisa Salazar Vizcaya, Nello Blaser, Thomas Gsponer",
  "Maintainer": "Luisa Salazar Vizcaya <luisapaola.salazarvizcaya@insel.ch>",
  "Description": "Simulate and analyze multistate models with general hazard\nfunctions. gems provides functionality for the preparation of\nhazard functions and parameters, simulation from a general\nmultistate model and predicting future events. The multistate\nmodel is not required to be a Markov model and may take the\nhistory of previous events into account. In the basic version,\nit allows to simulate from transition-specific hazard function,\nwhose parameters are multivariable normally distributed.",
  "License": "GPL-2",
  "RoxygenNote": "5.0.1",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-24 08:48:22 UTC",
    "User": "root"
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  "Repository": "https://svizcaya.r-universe.dev",
  "Date/Publication": "2017-03-26 15:02:51 UTC",
  "RemoteUrl": "https://github.com/cran/gems",
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    "author": "Luisa Salazar Vizcaya <luisapaola.salazarvizcaya@insel.ch>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.1.1\n",
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    "login": "svizcaya",
    "description": "",
    "uuid": 103930926
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      "role": "Imports"
    },
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      "package": "methods",
      "role": "Imports"
    },
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  "_tags": [],
  "_stars": 0,
  "_contributors": [
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      "count": 1,
      "uuid": 103930926
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    "type": "user",
    "name": "Luisa Salazar"
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  "_downloads": {
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/gems"
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  "_searchresults": 33,
  "_rbuild": "4.6.0",
  "_assets": [
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    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
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    "extra/gems.html",
    "manual.pdf"
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  "_realowner": "svizcaya",
  "_cranurl": false,
  "_releases": [
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      "date": "2013-02-01"
    },
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      "date": "2013-02-18"
    },
    {
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      "date": "2013-06-19"
    },
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      "date": "2013-07-08"
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      "date": "2016-11-29"
    },
    {
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      "date": "2017-03-26"
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  ],
  "_exports": [
    "cumulativeIncidence",
    "generateHazardMatrix",
    "generateParameterCovarianceMatrix",
    "generateParameterMatrix",
    "head",
    "plot",
    "possibleTransitions",
    "print",
    "simulateCohort",
    "summary",
    "tail",
    "transitionProbabilities",
    "update"
  ],
  "_datasets": [
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      "name": "tavi",
      "title": "tavi data set",
      "object": "tavi",
      "file": "tavi.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "id",
        "kidney",
        "kidney.dur",
        "bleeding",
        "bleeding.dur",
        "death",
        "death.dur"
      ],
      "rows": 194,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "ArtCohort",
      "title": "Class '\"ArtCohort\"'",
      "topics": [
        "ArtCohort",
        "ArtCohort-class",
        "head,ArtCohort-method",
        "head.ArtCohort",
        "summary,ArtCohort-method",
        "summary.ArtCohort",
        "tail,ArtCohort-method",
        "tail.ArtCohort",
        "update,ArtCohort-method",
        "update.ArtCohort",
        "[,ArtCohort,ANY,ANY,ANY-method",
        "[,ArtCohort-method",
        "[.ArtCohort"
      ]
    },
    {
      "page": "cumulativeIncidence",
      "title": "transition probabilities",
      "topics": [
        "cumulativeIncidence"
      ]
    },
    {
      "page": "gems",
      "title": "gems: Generalized Multistate Simulation Model",
      "topics": [
        "gems-package",
        "gems"
      ]
    },
    {
      "page": "generateHazardMatrix",
      "title": "generate template for transition functions",
      "topics": [
        "generateHazardMatrix"
      ]
    },
    {
      "page": "generateParameterCovarianceMatrix",
      "title": "generate a template for parameter covariances",
      "topics": [
        "generateParameterCovarianceMatrix"
      ]
    },
    {
      "page": "generateParameterMatrix",
      "title": "generate a template for mean parameters",
      "topics": [
        "generateParameterMatrix"
      ]
    },
    {
      "page": "PosteriorProbabilities",
      "title": "Class '\"PosteriorProbabilities\"'",
      "topics": [
        "head,PosteriorProbabilities-method",
        "head.PosteriorProbabilities",
        "plot,PosteriorProbabilities-method",
        "plot.PosteriorProbabilities",
        "PosteriorProbabilities",
        "PosteriorProbabilities-class",
        "tail,PosteriorProbabilities-method",
        "tail.PosteriorProbabilities",
        "[,PosteriorProbabilities,ANY,ANY,ANY-method",
        "[,PosteriorProbabilities-method",
        "[.PosteriorProbabilities"
      ]
    },
    {
      "page": "simulateCohort",
      "title": "Simulate cohort",
      "topics": [
        "simulateCohort"
      ]
    },
    {
      "page": "tavi",
      "title": "tavi data set",
      "topics": [
        "tavi"
      ]
    },
    {
      "page": "transition.structure",
      "title": "Class '\"transition.structure\"'",
      "topics": [
        "possibleTransitions",
        "possibleTransitions,transition.structure-method",
        "print,transition.structure-method",
        "print.transition.structure",
        "transition.structure",
        "transition.structure-class",
        "[[,transition.structure-method",
        "[[.transition.structure",
        "[[<-,transition.structure-method",
        "[[<-.transition.structure"
      ]
    },
    {
      "page": "transitionProbabilities",
      "title": "transition probabilities",
      "topics": [
        "transitionProbabilities"
      ]
    }
  ],
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    "data.table",
    "expm",
    "generics",
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    "lattice",
    "lifecycle",
    "magrittr",
    "MASS",
    "Matrix",
    "msm",
    "mvtnorm",
    "pillar",
    "pkgconfig",
    "plyr",
    "Rcpp",
    "rlang",
    "survival",
    "tibble",
    "utf8",
    "vctrs"
  ],
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    {
      "source": "gems.Rnw",
      "filename": "gems.pdf",
      "title": "gems",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2015-03-11",
      "modified": "2015-03-11",
      "commits": 1
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  "_nocasepkg": "gems",
  "_universes": [
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