Introduction | Technical description | Using the package | Case study | Conclusion
Package: gems 1.1.1
gems: Generalized Multistate Simulation Model
Simulate and analyze multistate models with general hazard functions. gems provides functionality for the preparation of hazard functions and parameters, simulation from a general multistate model and predicting future events. The multistate model is not required to be a Markov model and may take the history of previous events into account. In the basic version, it allows to simulate from transition-specific hazard function, whose parameters are multivariable normally distributed.
Authors:
gems_1.1.1.tar.gz
gems_1.1.1.zip(r-4.7)gems_1.1.1.zip(r-4.6)gems_1.1.1.zip(r-4.5)
gems_1.1.1.tgz(r-4.6-any)gems_1.1.1.tgz(r-4.5-any)
gems_1.1.1.tar.gz(r-4.7-any)gems_1.1.1.tar.gz(r-4.6-any)
gems_1.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
gems/json (API)
| # Install 'gems' in R: |
| install.packages('gems', repos = c('https://svizcaya.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- tavi - Tavi data set
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:26288ef55d. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 120 | ||
| source / vignettes | OK | 185 | ||
| linux-release-x86_64 | OK | 124 | ||
| macos-release-arm64 | OK | 150 | ||
| macos-oldrel-arm64 | OK | 165 | ||
| windows-devel | OK | 80 | ||
| windows-release | OK | 77 | ||
| windows-oldrel | OK | 88 | ||
| wasm-release | OK | 105 |
Exports:cumulativeIncidencegenerateHazardMatrixgenerateParameterCovarianceMatrixgenerateParameterMatrixheadplotpossibleTransitionsprintsimulateCohortsummarytailtransitionProbabilitiesupdate
Dependencies:clidata.tableexpmgenericsgluelatticelifecyclemagrittrMASSMatrixmsmmvtnormpillarpkgconfigplyrRcpprlangsurvivaltibbleutf8vctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Class '"ArtCohort"' | ArtCohort ArtCohort-class head,ArtCohort-method head.ArtCohort summary,ArtCohort-method summary.ArtCohort tail,ArtCohort-method tail.ArtCohort update,ArtCohort-method update.ArtCohort [,ArtCohort,ANY,ANY,ANY-method [,ArtCohort-method [.ArtCohort |
| transition probabilities | cumulativeIncidence |
| gems: Generalized Multistate Simulation Model | gems-package gems |
| generate template for transition functions | generateHazardMatrix |
| generate a template for parameter covariances | generateParameterCovarianceMatrix |
| generate a template for mean parameters | generateParameterMatrix |
| Class '"PosteriorProbabilities"' | head,PosteriorProbabilities-method head.PosteriorProbabilities plot,PosteriorProbabilities-method plot.PosteriorProbabilities PosteriorProbabilities PosteriorProbabilities-class tail,PosteriorProbabilities-method tail.PosteriorProbabilities [,PosteriorProbabilities,ANY,ANY,ANY-method [,PosteriorProbabilities-method [.PosteriorProbabilities |
| Simulate cohort | simulateCohort |
| tavi data set | tavi |
| Class '"transition.structure"' | possibleTransitions possibleTransitions,transition.structure-method print,transition.structure-method print.transition.structure transition.structure transition.structure-class [[,transition.structure-method [[.transition.structure [[<-,transition.structure-method [[<-.transition.structure |
| transition probabilities | transitionProbabilities |
